ThaumatinV1, Main, Exploration, bibRecord, 000088

Gene expression analysis in Musa acuminata during compatible interactions with Meloidogyne incognita.

Identifieur interne : 000088 ( Main/Exploration ); précédent : 000087; suivant : 000089

Gene expression analysis in Musa acuminata during compatible interactions with Meloidogyne incognita.

Auteurs : Nancy Eunice Ni O Casta Eda [Brésil] ; Gabriel Sergio Costa Alves [Brésil] ; Rosane Mansan Almeida [Brésil] ; Edson Perito Amorim [Brésil] ; Claudia Fortes Ferreira [Brésil] ; Roberto Coiti Togawa [Brésil] ; Marcos Mota Do Carmo Costa [Brésil] ; Priscila Grynberg [Brésil] ; Jansen Rodrigo Pereira Santos [États-Unis] ; Juvenil Enrique Cares [Brésil] ; Robert Neil Gerard Miller [Brésil]

Source :

Annals of botany [ 1095-8290 ] ; 2017.

RBID : pubmed:28130221

Descripteurs français

KwdFr :
- Analyse de profil d'expression de gènes (MeSH), Animaux (MeSH), Maladies des plantes (génétique), Musa (génétique), Musa (parasitologie), Protéines végétales (génétique), Protéines végétales (métabolisme), Racines de plante (génétique), Racines de plante (métabolisme), Transcriptome (MeSH), Tylenchoidea (physiologie).
MESH :
- génétique : Maladies des plantes, Musa, Protéines végétales, Racines de plante.
- métabolisme : Protéines végétales, Racines de plante.
- parasitologie : Musa.
- physiologie : Tylenchoidea.
- Analyse de profil d'expression de gènes, Animaux, Transcriptome.

English descriptors

KwdEn :
- Animals (MeSH), Gene Expression Profiling (MeSH), Musa (genetics), Musa (parasitology), Plant Diseases (genetics), Plant Proteins (genetics), Plant Proteins (metabolism), Plant Roots (genetics), Plant Roots (metabolism), Transcriptome (MeSH), Tylenchoidea (physiology).
MESH :
- chemical , genetics : Plant Proteins.
- genetics : Musa, Plant Diseases, Plant Roots.
- chemical , metabolism : Plant Proteins, Plant Roots.
- parasitology : Musa.
- physiology : Tylenchoidea.
- Animals, Gene Expression Profiling, Transcriptome.

Abstract

Background and Aims

Endoparasitic root-knot nematodes (RKNs) ( Meloidogyne spp.) cause considerable losses in banana ( Musa spp.), with Meloidogyne incognita a predominant species in Cavendish sub-group bananas. This study investigates the root transcriptome in Musa acuminata genotypes 4297-06 (AA) and Cavendish Grande Naine (CAV; AAA) during early compatible interactions with M. incognita .

Methods

Roots were analysed by brightfield light microscopy over a 35 d period to examine nematode penetration and morphological cell transformation. RNA samples were extracted 3, 7 and 10 days after inoculation (DAI) with nematode J2 juveniles, and cDNA libraries were sequenced using lllumina HiSeq technology. Sequences were mapped to the M. acuminata ssp. malaccensis var. Pahang genome sequence, differentially expressed genes (DEGs) identified and transcript representation determined by gene set enrichment and pathway mapping.

Key Results

Microscopic analysis revealed a life cycle of M. incognita completing in 24 d in CAV and 27 d in 4279-06. Comparable numbers of DEGs were up- and downregulated in each genotype, with potential involvement of many in early host defence responses involving reactive oxygen species and jasmonate/ethylene signalling. DEGs revealed concomitant auxin metabolism and cell wall modification processes likely to be involved in giant cell formation. Notable transcripts related to host defence included those coding for leucine-rich repeat receptor-like serine/threonine-protein kinases, peroxidases, thaumatin-like pathogenesis-related proteins, and DREB, ERF, MYB, NAC and WRKY transcription factors. Transcripts related to giant cell development included indole acetic acid-amido synthetase GH3.8 genes, involved in auxin metabolism, as well as genes encoding expansins and hydrolases, involved in cell wall modification.

Conclusions

Expression analysis in M. acuminata during compatible interactions with RKNs provides insights into genes modulated during infection and giant cell formation. Increased understanding of both defence responses to limit parasitism during compatible interactions and effector-targeted host genes in this complex interaction will facilitate the development of genetic improvement measures for RKNs.

DOI: 10.1093/aob/mcw272
PubMed: 28130221
PubMed Central: PMC5604581

Affiliations:

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Le document en format XML

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<author><name sortKey="Togawa, Roberto Coiti" sort="Togawa, Roberto Coiti" uniqKey="Togawa R" first="Roberto Coiti" last="Togawa">Roberto Coiti Togawa</name>
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<author><name sortKey="Costa, Marcos Mota Do Carmo" sort="Costa, Marcos Mota Do Carmo" uniqKey="Costa M" first="Marcos Mota Do Carmo" last="Costa">Marcos Mota Do Carmo Costa</name>
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<author><name sortKey="Grynberg, Priscila" sort="Grynberg, Priscila" uniqKey="Grynberg P" first="Priscila" last="Grynberg">Priscila Grynberg</name>
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<author><name sortKey="Santos, Jansen Rodrigo Pereira" sort="Santos, Jansen Rodrigo Pereira" uniqKey="Santos J" first="Jansen Rodrigo Pereira" last="Santos">Jansen Rodrigo Pereira Santos</name>
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<author><name sortKey="Cares, Juvenil Enrique" sort="Cares, Juvenil Enrique" uniqKey="Cares J" first="Juvenil Enrique" last="Cares">Juvenil Enrique Cares</name>
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<author><name sortKey="Miller, Robert Neil Gerard" sort="Miller, Robert Neil Gerard" uniqKey="Miller R" first="Robert Neil Gerard" last="Miller">Robert Neil Gerard Miller</name>
<affiliation wicri:level="2"><nlm:affiliation>Universidade de Brasília, Instituto de Ciências Biológicas, CEP 70910-900, Brasilia, DF, Brazil.</nlm:affiliation>
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<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Animals (MeSH)</term>
<term>Gene Expression Profiling (MeSH)</term>
<term>Musa (genetics)</term>
<term>Musa (parasitology)</term>
<term>Plant Diseases (genetics)</term>
<term>Plant Proteins (genetics)</term>
<term>Plant Proteins (metabolism)</term>
<term>Plant Roots (genetics)</term>
<term>Plant Roots (metabolism)</term>
<term>Transcriptome (MeSH)</term>
<term>Tylenchoidea (physiology)</term>
</keywords>
<keywords scheme="KwdFr" xml:lang="fr"><term>Analyse de profil d'expression de gènes (MeSH)</term>
<term>Animaux (MeSH)</term>
<term>Maladies des plantes (génétique)</term>
<term>Musa (génétique)</term>
<term>Musa (parasitologie)</term>
<term>Protéines végétales (génétique)</term>
<term>Protéines végétales (métabolisme)</term>
<term>Racines de plante (génétique)</term>
<term>Racines de plante (métabolisme)</term>
<term>Transcriptome (MeSH)</term>
<term>Tylenchoidea (physiologie)</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>Plant Proteins</term>
</keywords>
<keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Musa</term>
<term>Plant Diseases</term>
<term>Plant Roots</term>
</keywords>
<keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>Maladies des plantes</term>
<term>Musa</term>
<term>Protéines végétales</term>
<term>Racines de plante</term>
</keywords>
<keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Plant Proteins</term>
<term>Plant Roots</term>
</keywords>
<keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Protéines végétales</term>
<term>Racines de plante</term>
</keywords>
<keywords scheme="MESH" qualifier="parasitologie" xml:lang="fr"><term>Musa</term>
</keywords>
<keywords scheme="MESH" qualifier="parasitology" xml:lang="en"><term>Musa</term>
</keywords>
<keywords scheme="MESH" qualifier="physiologie" xml:lang="fr"><term>Tylenchoidea</term>
</keywords>
<keywords scheme="MESH" qualifier="physiology" xml:lang="en"><term>Tylenchoidea</term>
</keywords>
<keywords scheme="MESH" xml:lang="en"><term>Animals</term>
<term>Gene Expression Profiling</term>
<term>Transcriptome</term>
</keywords>
<keywords scheme="MESH" xml:lang="fr"><term>Analyse de profil d'expression de gènes</term>
<term>Animaux</term>
<term>Transcriptome</term>
</keywords>
</textClass>
</profileDesc>
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<front><div type="abstract" xml:lang="en"><p><b>Background and Aims</b>
</p>
<p>Endoparasitic root-knot nematodes (RKNs) ( Meloidogyne spp.) cause considerable losses in banana ( Musa spp.), with Meloidogyne incognita a predominant species in Cavendish sub-group bananas. This study investigates the root transcriptome in Musa acuminata genotypes 4297-06 (AA) and Cavendish Grande Naine (CAV; AAA) during early compatible interactions with M. incognita .</p>
</div>
<div type="abstract" xml:lang="en"><p><b>Methods</b>
</p>
<p>Roots were analysed by brightfield light microscopy over a 35 d period to examine nematode penetration and morphological cell transformation. RNA samples were extracted 3, 7 and 10 days after inoculation (DAI) with nematode J2 juveniles, and cDNA libraries were sequenced using lllumina HiSeq technology. Sequences were mapped to the M. acuminata ssp. malaccensis var. Pahang genome sequence, differentially expressed genes (DEGs) identified and transcript representation determined by gene set enrichment and pathway mapping.</p>
</div>
<div type="abstract" xml:lang="en"><p><b>Key Results</b>
</p>
<p>Microscopic analysis revealed a life cycle of M. incognita completing in 24 d in CAV and 27 d in 4279-06. Comparable numbers of DEGs were up- and downregulated in each genotype, with potential involvement of many in early host defence responses involving reactive oxygen species and jasmonate/ethylene signalling. DEGs revealed concomitant auxin metabolism and cell wall modification processes likely to be involved in giant cell formation. Notable transcripts related to host defence included those coding for leucine-rich repeat receptor-like serine/threonine-protein kinases, peroxidases, thaumatin-like pathogenesis-related proteins, and DREB, ERF, MYB, NAC and WRKY transcription factors. Transcripts related to giant cell development included indole acetic acid-amido synthetase GH3.8 genes, involved in auxin metabolism, as well as genes encoding expansins and hydrolases, involved in cell wall modification.</p>
</div>
<div type="abstract" xml:lang="en"><p><b>Conclusions</b>
</p>
<p>Expression analysis in M. acuminata during compatible interactions with RKNs provides insights into genes modulated during infection and giant cell formation. Increased understanding of both defence responses to limit parasitism during compatible interactions and effector-targeted host genes in this complex interaction will facilitate the development of genetic improvement measures for RKNs.</p>
</div>
</front>
</TEI>
<pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">28130221</PMID>
<DateCompleted><Year>2017</Year>
<Month>05</Month>
<Day>17</Day>
</DateCompleted>
<DateRevised><Year>2018</Year>
<Month>11</Month>
<Day>13</Day>
</DateRevised>
<Article PubModel="Print"><Journal><ISSN IssnType="Electronic">1095-8290</ISSN>
<JournalIssue CitedMedium="Internet"><Volume>119</Volume>
<Issue>5</Issue>
<PubDate><Year>2017</Year>
<Month>03</Month>
<Day>01</Day>
</PubDate>
</JournalIssue>
<Title>Annals of botany</Title>
<ISOAbbreviation>Ann Bot</ISOAbbreviation>
</Journal>
<ArticleTitle>Gene expression analysis in Musa acuminata during compatible interactions with Meloidogyne incognita.</ArticleTitle>
<Pagination><MedlinePgn>915-930</MedlinePgn>
</Pagination>
<ELocationID EIdType="doi" ValidYN="Y">10.1093/aob/mcw272</ELocationID>
<Abstract><AbstractText Label="Background and Aims">Endoparasitic root-knot nematodes (RKNs) ( Meloidogyne spp.) cause considerable losses in banana ( Musa spp.), with Meloidogyne incognita a predominant species in Cavendish sub-group bananas. This study investigates the root transcriptome in Musa acuminata genotypes 4297-06 (AA) and Cavendish Grande Naine (CAV; AAA) during early compatible interactions with M. incognita .</AbstractText>
<AbstractText Label="Methods">Roots were analysed by brightfield light microscopy over a 35 d period to examine nematode penetration and morphological cell transformation. RNA samples were extracted 3, 7 and 10 days after inoculation (DAI) with nematode J2 juveniles, and cDNA libraries were sequenced using lllumina HiSeq technology. Sequences were mapped to the M. acuminata ssp. malaccensis var. Pahang genome sequence, differentially expressed genes (DEGs) identified and transcript representation determined by gene set enrichment and pathway mapping.</AbstractText>
<AbstractText Label="Key Results">Microscopic analysis revealed a life cycle of M. incognita completing in 24 d in CAV and 27 d in 4279-06. Comparable numbers of DEGs were up- and downregulated in each genotype, with potential involvement of many in early host defence responses involving reactive oxygen species and jasmonate/ethylene signalling. DEGs revealed concomitant auxin metabolism and cell wall modification processes likely to be involved in giant cell formation. Notable transcripts related to host defence included those coding for leucine-rich repeat receptor-like serine/threonine-protein kinases, peroxidases, thaumatin-like pathogenesis-related proteins, and DREB, ERF, MYB, NAC and WRKY transcription factors. Transcripts related to giant cell development included indole acetic acid-amido synthetase GH3.8 genes, involved in auxin metabolism, as well as genes encoding expansins and hydrolases, involved in cell wall modification.</AbstractText>
<AbstractText Label="Conclusions">Expression analysis in M. acuminata during compatible interactions with RKNs provides insights into genes modulated during infection and giant cell formation. Increased understanding of both defence responses to limit parasitism during compatible interactions and effector-targeted host genes in this complex interaction will facilitate the development of genetic improvement measures for RKNs.</AbstractText>
<CopyrightInformation>© The Author 2017. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com</CopyrightInformation>
</Abstract>
<AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Castañeda</LastName>
<ForeName>Nancy Eunice Niño</ForeName>
<Initials>NEN</Initials>
<AffiliationInfo><Affiliation>Universidade de Brasília, Instituto de Ciências Biológicas, CEP 70910-900, Brasilia, DF, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Alves</LastName>
<ForeName>Gabriel Sergio Costa</ForeName>
<Initials>GSC</Initials>
<AffiliationInfo><Affiliation>Universidade de Brasília, Instituto de Ciências Biológicas, CEP 70910-900, Brasilia, DF, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Almeida</LastName>
<ForeName>Rosane Mansan</ForeName>
<Initials>RM</Initials>
<AffiliationInfo><Affiliation>Universidade de Brasília, Instituto de Ciências Biológicas, CEP 70910-900, Brasilia, DF, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Amorim</LastName>
<ForeName>Edson Perito</ForeName>
<Initials>EP</Initials>
<AffiliationInfo><Affiliation>Embrapa Cassava and Tropical Fruits, CEP 44380-000, Cruz das Almas, BA, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Fortes Ferreira</LastName>
<ForeName>Claudia</ForeName>
<Initials>C</Initials>
<AffiliationInfo><Affiliation>Embrapa Cassava and Tropical Fruits, CEP 44380-000, Cruz das Almas, BA, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Togawa</LastName>
<ForeName>Roberto Coiti</ForeName>
<Initials>RC</Initials>
<AffiliationInfo><Affiliation>Embrapa Recursos Genéticos e Biotecnologia, Parque Estação Biológica, CP 02372, CEP 70770-917, Brasília, DF, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Costa</LastName>
<ForeName>Marcos Mota Do Carmo</ForeName>
<Initials>MMDC</Initials>
<AffiliationInfo><Affiliation>Embrapa Recursos Genéticos e Biotecnologia, Parque Estação Biológica, CP 02372, CEP 70770-917, Brasília, DF, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Grynberg</LastName>
<ForeName>Priscila</ForeName>
<Initials>P</Initials>
<AffiliationInfo><Affiliation>Embrapa Recursos Genéticos e Biotecnologia, Parque Estação Biológica, CP 02372, CEP 70770-917, Brasília, DF, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Santos</LastName>
<ForeName>Jansen Rodrigo Pereira</ForeName>
<Initials>JRP</Initials>
<AffiliationInfo><Affiliation>University of California, Department of Nematology, 900 University Avenue, Riverside, CA 92521, USA.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Cares</LastName>
<ForeName>Juvenil Enrique</ForeName>
<Initials>JE</Initials>
<AffiliationInfo><Affiliation>Universidade de Brasília, Instituto de Ciências Biológicas, CEP 70910-900, Brasilia, DF, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
<Author ValidYN="Y"><LastName>Miller</LastName>
<ForeName>Robert Neil Gerard</ForeName>
<Initials>RNG</Initials>
<AffiliationInfo><Affiliation>Universidade de Brasília, Instituto de Ciências Biológicas, CEP 70910-900, Brasilia, DF, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
</AuthorList>
<Language>eng</Language>
<PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType>
<PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType>
</PublicationTypeList>
</Article>
<MedlineJournalInfo><Country>England</Country>
<MedlineTA>Ann Bot</MedlineTA>
<NlmUniqueID>0372347</NlmUniqueID>
<ISSNLinking>0305-7364</ISSNLinking>
</MedlineJournalInfo>
<ChemicalList><Chemical><RegistryNumber>0</RegistryNumber>
<NameOfSubstance UI="D010940">Plant Proteins</NameOfSubstance>
</Chemical>
</ChemicalList>
<CitationSubset>IM</CitationSubset>
<MeshHeadingList><MeshHeading><DescriptorName UI="D000818" MajorTopicYN="N">Animals</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D020869" MajorTopicYN="N">Gene Expression Profiling</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D028521" MajorTopicYN="N">Musa</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
<QualifierName UI="Q000469" MajorTopicYN="Y">parasitology</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010935" MajorTopicYN="N">Plant Diseases</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="Y">genetics</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D010940" MajorTopicYN="N">Plant Proteins</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D018517" MajorTopicYN="N">Plant Roots</DescriptorName>
<QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName>
<QualifierName UI="Q000378" MajorTopicYN="N">metabolism</QualifierName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D059467" MajorTopicYN="Y">Transcriptome</DescriptorName>
</MeshHeading>
<MeshHeading><DescriptorName UI="D014431" MajorTopicYN="N">Tylenchoidea</DescriptorName>
<QualifierName UI="Q000502" MajorTopicYN="Y">physiology</QualifierName>
</MeshHeading>
</MeshHeadingList>
<KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="Y">Meloidogyne incognita</Keyword>
<Keyword MajorTopicYN="Y">Musa acuminata</Keyword>
<Keyword MajorTopicYN="Y">biotic stress</Keyword>
<Keyword MajorTopicYN="Y">monocotyledons</Keyword>
<Keyword MajorTopicYN="Y">root-knot nematode</Keyword>
<Keyword MajorTopicYN="Y">transcriptome</Keyword>
</KeywordList>
</MedlineCitation>
<PubmedData><History><PubMedPubDate PubStatus="received"><Year>2016</Year>
<Month>10</Month>
<Day>31</Day>
</PubMedPubDate>
<PubMedPubDate PubStatus="accepted"><Year>2016</Year>
<Month>12</Month>
<Day>01</Day>
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<Day>29</Day>
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</ArticleIdList>
<ReferenceList><Reference><Citation>Bioinformatics. 2015 Jan 15;31(2):166-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25260700</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Genomics. 2013 May 10;14:322</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23663436</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Annu Rev Phytopathol. 2014;52:551-81</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25001453</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Annu Rev Phytopathol. 2004;42:185-209</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15283665</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2010 Jan 1;26(1):139-40</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19910308</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2012 Jan;24(1):275-87</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22247251</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2009 Apr;149(4):1797-809</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19176718</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2010 Feb;61(4):698-712</Citation>
<ArticleIdList><ArticleId IdType="pubmed">20003167</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2015 Oct 21;10(10):e0140937</Citation>
<ArticleIdList><ArticleId IdType="pubmed">26488731</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Annu Rev Phytopathol. 2014;52:135-53</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24906129</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Annu Rev Phytopathol. 2006;44:135-62</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16602946</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Plant Microbe Interact. 2013 Jan;26(1):106-15</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23194343</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2005 Jul;138(3):1195-204</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16009995</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell Environ. 2014 May;37(5):1250-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24237261</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Ann Bot. 2005 Apr;95(5):707-35</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15749753</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Plant Microbe Interact. 2003 Feb;16(2):123-31</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12575746</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Biol (Stuttg). 2012 Mar;14 Suppl 1:73-82</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22188265</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Planta. 2006 Sep;224(4):838-52</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16575592</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Rice (N Y). 2014 Dec;7(1):23</Citation>
<ArticleIdList><ArticleId IdType="pubmed">26224554</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Bioinformatics. 2014 Aug 1;30(15):2114-20</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24695404</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Curr Biol. 2008 May 6;18(9):650-5</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18450451</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Nature. 2006 Nov 16;444(7117):323-9</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17108957</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2009 Mar;57(5):771-84</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18980640</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Annu Rev Phytopathol. 2005;43:205-27</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16078883</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell. 2006 May 19;125(4):749-60</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16713565</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell Rep. 2011 Mar;30(3):311-23</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21184231</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2009 Sep;21(9):2553-62</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19789282</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Gene. 2012 Jan 15;492(1):19-31</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22062000</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Trends Plant Sci. 2014 May;19(5):284-7</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24674878</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Curr Opin Plant Biol. 2012 Aug;15(4):349-57</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22705024</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Genomics. 2013 Aug 09;14 :540</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23937585</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Nematol. 1983 Jan;15(1):142-3</Citation>
<ArticleIdList><ArticleId IdType="pubmed">19295781</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2005 Nov;44(3):447-58</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16236154</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Front Plant Sci. 2014 Dec 19;5:739</Citation>
<ArticleIdList><ArticleId IdType="pubmed">25566306</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Annu Rev Plant Physiol Plant Mol Biol. 2001 Jun;52:67-88</Citation>
<ArticleIdList><ArticleId IdType="pubmed">11337392</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Genomics. 2013 Feb 05;14:78</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23379821</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>PLoS One. 2013 Sep 23;8(9):e73945</Citation>
<ArticleIdList><ArticleId IdType="pubmed">24086302</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Annu Rev Plant Physiol Plant Mol Biol. 1997 Jun;48:251-275</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15012264</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2003 Jan;15(1):165-78</Citation>
<ArticleIdList><ArticleId IdType="pubmed">12509529</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Bioinformatics. 2007 Feb 06;8:41</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17284313</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant J. 2004 Apr;38(2):203-14</Citation>
<ArticleIdList><ArticleId IdType="pubmed">15078325</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2005 Oct;139(2):949-59</Citation>
<ArticleIdList><ArticleId IdType="pubmed">16183832</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Ann Bot. 2017 Mar 1;119(5):885-899</Citation>
<ArticleIdList><ArticleId IdType="pubmed">28334204</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Science. 2007 Oct 5;318(5847):113-6</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17916738</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Cell. 2008 Jan;20(1):228-40</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18192436</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell. 1997 Oct 31;91(3):295-8</Citation>
<ArticleIdList><ArticleId IdType="pubmed">9363937</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Annu Rev Cell Dev Biol. 2012;28:489-521</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22559264</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>J Exp Bot. 2013 Sep;64(12):3885-98</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23881398</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Plant Physiol. 2011 Sep;157(1):305-16</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21715672</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Plant Microbe Interact. 2007 Mar;20(3):293-305</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17378432</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Cell Death Differ. 2011 Aug;18(8):1289-97</Citation>
<ArticleIdList><ArticleId IdType="pubmed">21546909</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>New Phytol. 2012 Nov;196(3):887-900</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22985291</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Phytopathology. 2005 Feb;95(2):158-65</Citation>
<ArticleIdList><ArticleId IdType="pubmed">18943985</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>BMC Genomics. 2012 Aug 05;13:374</Citation>
<ArticleIdList><ArticleId IdType="pubmed">22863187</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Plant Pathol. 2013 Dec;14(9):946-61</Citation>
<ArticleIdList><ArticleId IdType="pubmed">23809086</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Mol Plant Microbe Interact. 2007 May;20(5):510-25</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17506329</ArticleId>
</ArticleIdList>
</Reference>
<Reference><Citation>Planta. 2007 Nov;226(6):1423-47</Citation>
<ArticleIdList><ArticleId IdType="pubmed">17653570</ArticleId>
</ArticleIdList>
</Reference>
</ReferenceList>
</PubmedData>
</pubmed>
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Gene expression analysis in Musa acuminata during compatible interactions with Meloidogyne incognita.

Gene expression analysis in Musa acuminata during compatible interactions with Meloidogyne incognita.

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